PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_A12G1668
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family bZIP
Protein Properties Length: 190aa    MW: 21470 Da    PI: 7.7478
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_A12G1668genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_146.11.1e-1496154563
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                  kr rr+++NRe+ArrsR RKk++ieeL+  v +L++ N +L ++l +l ++  +  +e+
  Gh_A12G1668  96 KRLRRMISNRESARRSRMRKKQQIEELQSQVNQLQTINGQLSQKLINLLENNHEILQEN 154
                  9*******************************************999988888887776 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.4E-1692156IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.55394157IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1706.3E-1396168No hitNo description
PfamPF001702.4E-1396154IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.84E-1296147No hitNo description
CDDcd147024.48E-1897148No hitNo description
PROSITE patternPS00036099114IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    Send to blast
MEVPGFDVDR DPQPHGHRSL IQSLFAFCPS QKALTTSATH INMESWDGNS SSSQHPDSGI  60
FSHRLSPNTQ IHLFSPNPSN EDEGRVCQAS IVVDEKRLRR MISNRESARR SRMRKKQQIE  120
ELQSQVNQLQ TINGQLSQKL INLLENNHEI LQENAQLKEK VSTLHMVLSD VFAPLRNSDD  180
SSSMKPKSAS
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ghi.242823e-86ovule
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2431140.0AC243114.1 Gossypium raimondii clone GR__Ba0041F12-jfm, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012438913.11e-134PREDICTED: basic leucine zipper 43-like
TrEMBLA0A0D2PXH41e-134A0A0D2PXH4_G
STRINGPOPTR_0015s03580.11e-35(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM61852545
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60830.12e-26basic leucine-zipper 70